dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00187
Location and strand information: 37891 - 38265 (+)
Family: 3.D.1.8.1
Protein type: TC
Protein description: NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00188
Location and strand information: 38277 - 38864 (+)
Family: 3.D.1.3.1
Protein type: TC
Protein description: NADH-quinone oxidoreductase subunit 6

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00189
Location and strand information: 38907 - 40535 (+)
Family: 3.D.1.5.1
Protein type: TC
Protein description: NADH-quinone oxidoreductase subunit C/D

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00190
Location and strand information: 40569 - 41645 (+)
Family: 3.D.1.5.1
Protein type: TC
Protein description: NADH-quinone oxidoreductase subunit H

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00191
Location and strand information: 41689 - 43191 (+)
Family: 3.A.2.1.2
Protein type: TC
Protein description: ATP synthase subunit beta

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00192
Location and strand information: 43207 - 43440 (+)
Family: 3.A.2.1.6
Protein type: TC
Protein description: ATP synthase epsilon chain

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00193
Location and strand information: 43472 - 44560 (+)
Family: 3.A.2.1.7
Protein type: TC
Protein description: ATP synthase subunit a

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00194
Location and strand information: 44600 - 44845 (+)
Family: 3.A.2.1.6
Protein type: TC
Protein description: ATP synthase subunit c

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00195
Location and strand information: 44861 - 45358 (+)
Family: null
Protein type: null
Protein description: ATP synthase subunit b

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00196
Location and strand information: 45365 - 45913 (+)
Family: null
Protein type: null
Protein description: ATP synthase subunit delta

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00197
Location and strand information: 45920 - 47494 (+)
Family: 3.A.2.1.3
Protein type: TC
Protein description: ATP synthase subunit alpha

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00198
Location and strand information: 47508 - 48389 (+)
Family: 3.A.2.1.7
Protein type: TC
Protein description: ATP synthase gamma chain

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00199
Location and strand information: 48442 - 48963 (+)
Family: 3.D.1.6.3
Protein type: TC
Protein description: NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00200
Location and strand information: 49012 - 49530 (+)
Family: 3.D.9.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00201
Location and strand information: 49538 - 49852 (+)
Family: 3.D.1.2.1
Protein type: TC
Protein description: NADH-quinone oxidoreductase subunit 11

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00202
Location and strand information: 49859 - 51886 (+)
Family: 3.D.1.2.1
Protein type: TC
Protein description: NADH-quinone oxidoreductase subunit L

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00203
Location and strand information: 51917 - 53422 (+)
Family: 3.D.1.5.1
Protein type: TC
Protein description: NAD(P)H-quinone oxidoreductase chain 4 1

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00204
Location and strand information: 53436 - 54914 (+)
Family: 3.D.1.5.1
Protein type: TC
Protein description: NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00205
Location and strand information: 54938 - 55831 (+)
Family: null
Protein type: null
Protein description: 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00206
Location and strand information: 55839 - 59867 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00207
Location and strand information: 60212 - 63367 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00208
Location and strand information: 63389 - 65068 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00209
Location and strand information: 65246 - 66685 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00210
Location and strand information: 66709 - 69075 (+)
Family: CBM4|GH10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.1476
Protein molecular weight: 87404.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00211
Location and strand information: 69237 - 70931 (+)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6656
Protein molecular weight: 63185.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00212
Location and strand information: 70941 - 72656 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00213
Location and strand information: 72684 - 74114 (+)
Family: 2.A.2.3.2
Protein type: TC
Protein description: Glucuronide carrier protein

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00214
Location and strand information: 74185 - 75291 (+)
Family: GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 4.5815
Protein molecular weight: 41955.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00215
Location and strand information: 75313 - 76296 (+)
Family: GH43|GH43_1
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.7916
Protein molecular weight: 37422.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004490_2|CGC1
Gene ID: MGYG000004490_00216
Location and strand information: 76274 - 78316 (+)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 5.5966
Protein molecular weight: 75743.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004490_00187	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic	TC	37891	38265	+	3.D.1.8.1
MGYG000004490_00188	NADH-quinone oxidoreductase subunit 6	TC	38277	38864	+	3.D.1.3.1
MGYG000004490_00189	NADH-quinone oxidoreductase subunit C/D	TC	38907	40535	+	3.D.1.5.1
MGYG000004490_00190	NADH-quinone oxidoreductase subunit H	TC	40569	41645	+	3.D.1.5.1
MGYG000004490_00191	ATP synthase subunit beta	TC	41689	43191	+	3.A.2.1.2
MGYG000004490_00192	ATP synthase epsilon chain	TC	43207	43440	+	3.A.2.1.6
MGYG000004490_00193	ATP synthase subunit a	TC	43472	44560	+	3.A.2.1.7
MGYG000004490_00194	ATP synthase subunit c	TC	44600	44845	+	3.A.2.1.6
MGYG000004490_00195	ATP synthase subunit b	null	44861	45358	+	ATP-synt_B
MGYG000004490_00196	ATP synthase subunit delta	null	45365	45913	+	OSCP
MGYG000004490_00197	ATP synthase subunit alpha	TC	45920	47494	+	3.A.2.1.3
MGYG000004490_00198	ATP synthase gamma chain	TC	47508	48389	+	3.A.2.1.7
MGYG000004490_00199	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic	TC	48442	48963	+	3.D.1.6.3
MGYG000004490_00200	hypothetical protein	TC	49012	49530	+	3.D.9.1.1
MGYG000004490_00201	NADH-quinone oxidoreductase subunit 11	TC	49538	49852	+	3.D.1.2.1
MGYG000004490_00202	NADH-quinone oxidoreductase subunit L	TC	49859	51886	+	3.D.1.2.1
MGYG000004490_00203	NAD(P)H-quinone oxidoreductase chain 4 1	TC	51917	53422	+	3.D.1.5.1
MGYG000004490_00204	NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic	TC	53436	54914	+	3.D.1.5.1
MGYG000004490_00205	3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase	null	54938	55831	+	adh_short_C2
MGYG000004490_00206	Sensor histidine kinase RcsC	TF	55839	59867	-	HTH_AraC+HTH_AraC
MGYG000004490_00207	TonB-dependent receptor SusC	TC	60212	63367	+	1.B.14.6.1
MGYG000004490_00208	SusD-like protein	null	63389	65068	+	SusD-like_3\| SusD_RagB
MGYG000004490_00209	hypothetical protein	null	65246	66685	+	SGBP_B_XBD
MGYG000004490_00210	hypothetical protein	CAZyme	66709	69075	+	CBM4\| GH10
MGYG000004490_00211	hypothetical protein	CAZyme	69237	70931	+	GH35
MGYG000004490_00212	hypothetical protein	null	70941	72656	+	SASA\| Glyco_hydro_2_N\| SASA
MGYG000004490_00213	Glucuronide carrier protein	TC	72684	74114	+	2.A.2.3.2
MGYG000004490_00214	Endo-1,4-beta-xylanase A	CAZyme	74185	75291	+	GH10
MGYG000004490_00215	Xylosidase/arabinosidase	CAZyme	75313	76296	+	GH43\| GH43_1
MGYG000004490_00216	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	76274	78316	+	GH67
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004490_00210	GH10_e47\|3.2.1.8	xylan
MGYG000004490_00211	GH35_e24
MGYG000004490_00214	GH10_e61
MGYG000004490_00215	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000004490_00216	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan